
Qi Song
The power of data science and machine learning has accelerated the biology discovery and large-scale screening of gene... | Lawrence, New Jersey, United States
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Qi Song’s Emails qi****@ha****.edu
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Qi Song’s Location Lawrence, New Jersey, United States
Qi Song’s Expertise The power of data science and machine learning has accelerated the biology discovery and large-scale screening of gene candidates. Of note, characterizing the associations among genes can not only improve systematic understanding of disease associated pathways but also uncover novel candidate genes/biomarkers for therapies. My research focuses on developing machine learning based tool to unveil biological associations or applying/building computational tools to model single cell genomic data. Particularly, I have developed : 1) a multi-task learning based framework to reconstruct gene regulatory relationship from single cell data (Nucleic Acids Research, https://academic.oup.com/nar/article/51/7/e38/7033788)。 2) an unsupervised clustering tool for analyzing single cell data (Genome Biology, https://genomebiology.biomedcentral.com/articles/10.1186/s13059-022-02716-9). 3) drug discovery tool for Idiopathic Pulmonary Fibrosis (IPF). 4) a machine learning based framework for reconstructing stress response regulatory networks (Nucleic Acids Research, https://academic.oup.com/nar/article/48/11/e62/5824611) I have also been involved in several other single cell genomic projects that cover different themes: 1) machine-learning based aging effect prediction with senescence gene markers (under review). 2) probabilistic model based cell ordering for single cell genomic data.
Qi Song’s Current Industry Bristol Myers Squibb
Qi
Song’s Prior Industry
Virginia Tech
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Brigham And Womens Hospital
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Harvard Medical School
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Carnegie Mellon University
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Bristol Myers Squibb
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Work Experience

Bristol Myers Squibb
Senior Scientist
Fri Mar 01 2024 00:00:00 GMT+0000 (Coordinated Universal Time) — Present
Carnegie Mellon University
Postdoctoral Associate
Fri Jan 01 2021 00:00:00 GMT+0000 (Coordinated Universal Time) — Fri Mar 01 2024 00:00:00 GMT+0000 (Coordinated Universal Time)
Brigham And Womens Hospital
Postdoctoral Research Fellow
Tue Oct 01 2019 00:00:00 GMT+0000 (Coordinated Universal Time) — Fri Jan 01 2021 00:00:00 GMT+0000 (Coordinated Universal Time)
Harvard Medical School
Postdoctoral Research Fellow
Tue Oct 01 2019 00:00:00 GMT+0000 (Coordinated Universal Time) — Fri Jan 01 2021 00:00:00 GMT+0000 (Coordinated Universal Time)
Virginia Tech
Graduate Research Assistant
Sat Aug 01 2015 00:00:00 GMT+0000 (Coordinated Universal Time) — Thu Aug 01 2019 00:00:00 GMT+0000 (Coordinated Universal Time)